Since AICTE gives only 1,25,000 as tuition fees you need to pay additional fees yourself if tuition fees exceed 1,25,000. In your case, it looks like you need to pay 28000/year yourself.
There are some exceptional case as well, I am not sure about other states but if you are studying in Maharashtra then the state govt. have issued some circular under which academic fees cannot exceed 24000/year. So, in that case, you don't need to pay anything for academic fees (but if you are in your first year then you need to pay refundable deposits).
I hope you get your answer. If my answer didn't cover your case please comment below the exact details, I might help you to find your problem or other people in the community may help you out.